I've been browsing and learning from this site for the past year or so and ended up buying an '01 KDX220 earlier this year. So far I love the bike, minus the front suspension, which I'll be taking care of in the next few months.
I finally decided to pull the top end apart to see if it still had the stock piston. Things were looking pretty good until I pulled the cylinder off and looked at the cylinder walls and piston. There's pretty heavy scuffing which I can't tell if it's aluminum deposits from the piston or actual gouging.
Few questions:
1) Does the picture below look like there's damage to the cylinder or only deposits? I read that I can use muriatic acid to remove any aluminum deposits, but that it can also damage the cylinder if I'm not careful. Is that only if the Nikasil coating is worn away or will it burn through the coating as well? Do I use full strength acid or dilute it? Any tips would be great.

2) There are some areas around one of the ports that looks like the coating chipped off. I can definitely feel with my nail that it' a chip and not any kind of build-up. Is this reason enough to get the cylinder replated or should I not I worry about it?

3) Everything came apart easy until I got to the 3mm-headed allen screw on the KIPS rod. Unfortunately, even using a good socket and taking my time I ended up stripping the head. Any ideas on how to remove the screw?
Thanks,
Pete